WP1: Development
of testing algorithms for (future) detection and surveillance of noroviruses
and hepatitis A virus
• To evaluate the
performance of new commercially available rapid assays against state-of-the-art
reference tests.
• To develop rapid typing methods for application in routine
laboratories
• To propose a testing algorithm for high-throughput testing
in routine laboratories, which retains the possibility of analysing
a representative selection of samples for detection of common-source
events that go unnoticed by routine outbreak investigations
• To pilot these testing algorithms during one outbreak season
• To use the results to propose a testing algorithm to the surveillance
networks
WP2: Understanding
viral evolution to provide a rational basis for use of molecular typing
data in outbreak investigations.
• To customize the
FBVE database of viral genes reflecting the currently circulating
lineages of norovirus and hepatitis A virus in Europe, in order to
provide global access , including the possibility of rapid searches
via internet
• To select a representative set of viruses spanning a wide
geographic region and several years for studies of viral evolution
by mutation and recombination.
• To study biological properties of selected recombinant or
mutant strains against biological properties that are available from
the outbreak investigation database of the surveillance network
• To study the consequences of viral evolution for diagnostics
and typing
• To use this information to provide optimal tests for detection
and typing
WP3: Understanding
unexplained viral gastroenteritis and hepatitis caused by rare and/or
newly described pathogens (Kobuviruses, group B and C rotaviruses, toroviruses,
hepatitis E virus)
• To establish a
European resource of rare or new emerging enteric viruses
• To develop generic detection methods for all virus families
for which emergence through faecal-oral spread (e.g. through the food
chain) is foreseeable
• To use the new techniques to screen samples from patients
with unexplained gastro-enteritis and (acute) hepatitis of possible
viral aetiology to study their role as causes of (common source) outbreaks
in Europe
• To provide reference testing and scientific guidance for possible
requests from the surveillance networks or the seafood research network
WP4: Zoonotic
transmission of noroviruses, sapoviruses and hepeviruses
• To screen representative
samples from animals (cattle, pigs, mice), for the presence of noroviruses,
sapoviruses, and hepeviruses
• To establish a gene sequence database reflecting the diversity
of currently circulating viruses in the participating countries in
Europe
• To analyse the data for possible indications of direct interspecies
(zoonotic) transmission of viruses
• To analyse the data for possible indications of mixing of
viral genes from viruses infecting animals or humans
• To provide reference testing and scientific guidance for possible
requests from the surveillance networks or the seafood research network